Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rb1P13405 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 Gm38266-201ENSMUST00000194931 421 ntBASIC13.34□□□□□ -0.27
Rb1P13405 Gm45880-201ENSMUST00000213041 853 ntBASIC13.34□□□□□ -0.27
Rb1P13405 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.34□□□□□ -0.27
Rb1P13405 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rb1P13405 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rb1P13405 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rb1P13405 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rb1P13405 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.33□□□□□ -0.27
Rb1P13405 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Rb1P13405 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rb1P13405 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rb1P13405 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rb1P13405 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Gm4271-201ENSMUST00000174444 973 ntBASIC13.33□□□□□ -0.28
Rb1P13405 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Gm38144-201ENSMUST00000192790 465 ntBASIC13.33□□□□□ -0.28
Rb1P13405 Gm42627-201ENSMUST00000197347 224 ntBASIC13.33□□□□□ -0.28
Rb1P13405 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.33□□□□□ -0.28
Rb1P13405 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.33□□□□□ -0.28
Rb1P13405 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rb1P13405 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.33□□□□□ -0.28
Rb1P13405 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rb1P13405 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rb1P13405 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rb1P13405 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.32□□□□□ -0.28
Rb1P13405 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rb1P13405 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.32□□□□□ -0.28
Rb1P13405 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rb1P13405 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms