Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm19931-201ENSMUST00000198920 368 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.33□□□□□ -0.11
Hoxc6P10629 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.33□□□□□ -0.11
Hoxc6P10629 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc6P10629 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.33□□□□□ -0.11
Hoxc6P10629 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxc6P10629 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm8913-201ENSMUST00000209491 641 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc6P10629 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc6P10629 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.33□□□□□ -0.12
Hoxc6P10629 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc6P10629 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc6P10629 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Hoxc6P10629 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.32□□□□□ -0.12
Hoxc6P10629 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.32□□□□□ -0.12
Hoxc6P10629 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm8018-201ENSMUST00000173536 789 ntBASIC14.32□□□□□ -0.12
Hoxc6P10629 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc6P10629 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms