Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm22331-201ENSMUST00000158066 136 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm20614-201ENSMUST00000177106 632 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm27331-201ENSMUST00000183705 60 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm29649-201ENSMUST00000185649 419 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm8099-201ENSMUST00000200510 742 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm27839-201ENSMUST00000184242 106 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm37042-201ENSMUST00000193816 581 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm29705-201ENSMUST00000212598 474 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.29□□□□□ -0.6
PtcraP0C6B2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.29□□□□□ -0.6
PtcraP0C6B2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms