Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.71□□□□□ -0.21
Hoxc8P09025 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc8P09025 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hoxc8P09025 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc8P09025 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.71□□□□□ -0.22
Hoxc8P09025 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.7□□□□□ -0.22
Hoxc8P09025 Gm19994-201ENSMUST00000217086 586 ntBASIC13.7□□□□□ -0.22
Hoxc8P09025 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc8P09025 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc8P09025 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc8P09025 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm17040-202ENSMUST00000170597 889 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm43947-201ENSMUST00000203019 959 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm17812-201ENSMUST00000204935 318 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc8P09025 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.69□□□□□ -0.22
Hoxc8P09025 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.69□□□□□ -0.22
Hoxc8P09025 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hoxc8P09025 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc8P09025 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms