Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ApoeP08226 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.28□□□□□ -0.44
ApoeP08226 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Gm14767-201ENSMUST00000121559 586 ntBASIC12.28□□□□□ -0.44
ApoeP08226 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Gm5312-201ENSMUST00000203728 547 ntBASIC12.28□□□□□ -0.44
ApoeP08226 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.28□□□□□ -0.44
ApoeP08226 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.28□□□□□ -0.44
ApoeP08226 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ApoeP08226 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.28□□□□□ -0.44
ApoeP08226 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
ApoeP08226 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ApoeP08226 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.27□□□□□ -0.44
ApoeP08226 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ApoeP08226 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.27□□□□□ -0.44
ApoeP08226 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ApoeP08226 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.27□□□□□ -0.45
ApoeP08226 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ApoeP08226 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ApoeP08226 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.27□□□□□ -0.45
ApoeP08226 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.27□□□□□ -0.45
ApoeP08226 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.27□□□□□ -0.45
ApoeP08226 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.27□□□□□ -0.45
ApoeP08226 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.27□□□□□ -0.45
ApoeP08226 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.27□□□□□ -0.45
ApoeP08226 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
ApoeP08226 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ApoeP08226 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ApoeP08226 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms