Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.52□□□□□ -0.73
P06323 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
P06323 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Gm14719-201ENSMUST00000121891 340 ntBASIC10.52□□□□□ -0.73
P06323 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Gm42550-201ENSMUST00000201553 960 ntBASIC10.52□□□□□ -0.73
P06323 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P06323 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.52□□□□□ -0.73
P06323 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.52□□□□□ -0.73
P06323 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P06323 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
P06323 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.52□□□□□ -0.73
P06323 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P06323 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06323 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.51□□□□□ -0.73
P06323 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
P06323 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.51□□□□□ -0.73
P06323 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
P06323 Gm15920-201ENSMUST00000118998 402 ntBASIC10.51□□□□□ -0.73
P06323 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.51□□□□□ -0.73
P06323 Gm15376-201ENSMUST00000122258 783 ntBASIC10.51□□□□□ -0.73
P06323 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.51□□□□□ -0.73
P06323 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
P06323 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.51□□□□□ -0.73
P06323 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.51□□□□□ -0.73
P06323 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.51□□□□□ -0.73
P06323 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P06323 Gm29608-201ENSMUST00000190444 463 ntBASIC10.51□□□□□ -0.73
P06323 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.51□□□□□ -0.73
P06323 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.51□□□□□ -0.73
P06323 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.51□□□□□ -0.73
P06323 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gm5867-201ENSMUST00000063197 592 ntBASIC10.51□□□□□ -0.73
P06323 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P06323 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
P06323 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.51□□□□□ -0.73
P06323 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.51□□□□□ -0.73
P06323 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.51□□□□□ -0.73
P06323 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.51□□□□□ -0.73
P06323 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06323 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.5□□□□□ -0.73
P06323 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Matn2-203ENSMUST00000226766 3252 ntBASIC10.5□□□□□ -0.73
P06323 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06323 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
P06323 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms