Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H3f3cP02301 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H3f3cP02301 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
H3f3cP02301 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
H3f3cP02301 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Proscos-202ENSMUST00000178990 666 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Gm5745-201ENSMUST00000183748 313 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 Gm27486-201ENSMUST00000184923 80 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Gm44069-201ENSMUST00000204898 506 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
H3f3cP02301 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
H3f3cP02301 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
H3f3cP02301 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
H3f3cP02301 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.16□□□□□ -0.62
H3f3cP02301 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
H3f3cP02301 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
H3f3cP02301 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.15□□□□□ -0.62
H3f3cP02301 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H3f3cP02301 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
H3f3cP02301 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
H3f3cP02301 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Gm8652-201ENSMUST00000181363 964 ntBASIC11.15□□□□□ -0.62
H3f3cP02301 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.15□□□□□ -0.62
H3f3cP02301 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.15□□□□□ -0.62
H3f3cP02301 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.15□□□□□ -0.62
H3f3cP02301 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.15□□□□□ -0.62
H3f3cP02301 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.15□□□□□ -0.62
H3f3cP02301 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H3f3cP02301 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
H3f3cP02301 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H3f3cP02301 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
H3f3cP02301 Pck2-205ENSMUST00000226352 2784 ntBASIC11.15□□□□□ -0.63
H3f3cP02301 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
H3f3cP02301 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
H3f3cP02301 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
H3f3cP02301 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
H3f3cP02301 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.14□□□□□ -0.63
H3f3cP02301 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
H3f3cP02301 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.14□□□□□ -0.63
H3f3cP02301 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms