Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vti1aO89116 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
Vti1aO89116 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14□□□□□ -0.17
Vti1aO89116 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vti1aO89116 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Gm15370-201ENSMUST00000117158 253 ntBASIC14□□□□□ -0.17
Vti1aO89116 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Gm5637-201ENSMUST00000153890 1119 ntBASIC14□□□□□ -0.17
Vti1aO89116 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14□□□□□ -0.17
Vti1aO89116 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Vti1aO89116 Gm43758-201ENSMUST00000199500 367 ntBASIC14□□□□□ -0.17
Vti1aO89116 Gm44069-201ENSMUST00000204898 506 ntBASIC14□□□□□ -0.17
Vti1aO89116 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14□□□□□ -0.17
Vti1aO89116 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14□□□□□ -0.17
Vti1aO89116 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1aO89116 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vti1aO89116 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.99□□□□□ -0.17
Vti1aO89116 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vti1aO89116 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm6023-201ENSMUST00000118217 606 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Gm6447-201ENSMUST00000118905 835 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm37489-201ENSMUST00000191883 159 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Gm18056-201ENSMUST00000207670 568 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Gm18061-201ENSMUST00000208350 562 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Gm18063-201ENSMUST00000208529 568 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Gm18052-201ENSMUST00000208750 559 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Gm45865-201ENSMUST00000211815 945 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.99□□□□□ -0.17
Vti1aO89116 Cts7-204ENSMUST00000225321 1257 ntBASIC13.99□□□□□ -0.17
Vti1aO89116 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vti1aO89116 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1aO89116 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.98□□□□□ -0.17
Vti1aO89116 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms