Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ClppO88696 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.73□□□□□ -0.37
ClppO88696 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.73□□□□□ -0.37
ClppO88696 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ClppO88696 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm16177-201ENSMUST00000120728 718 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm12403-201ENSMUST00000121384 959 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm4271-201ENSMUST00000174444 973 ntBASIC12.73□□□□□ -0.37
ClppO88696 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.73□□□□□ -0.37
ClppO88696 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.73□□□□□ -0.37
ClppO88696 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.73□□□□□ -0.37
ClppO88696 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.73□□□□□ -0.37
ClppO88696 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.73□□□□□ -0.37
ClppO88696 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.73□□□□□ -0.37
ClppO88696 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ClppO88696 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClppO88696 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClppO88696 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.72□□□□□ -0.37
ClppO88696 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.72□□□□□ -0.37
ClppO88696 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.72□□□□□ -0.37
ClppO88696 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.72□□□□□ -0.37
ClppO88696 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.72□□□□□ -0.37
ClppO88696 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.72□□□□□ -0.37
ClppO88696 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ClppO88696 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClppO88696 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms