Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.99□□□□□ -0.49
Cops4O88544 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.98□□□□□ -0.49
Cops4O88544 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.98□□□□□ -0.49
Cops4O88544 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.98□□□□□ -0.49
Cops4O88544 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.98□□□□□ -0.49
Cops4O88544 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Gm27680-201ENSMUST00000184192 160 ntBASIC11.98□□□□□ -0.49
Cops4O88544 Gm10766-202ENSMUST00000194123 606 ntBASIC11.98□□□□□ -0.49
Cops4O88544 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cops4O88544 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cops4O88544 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cops4O88544 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.98□□□□□ -0.49
Cops4O88544 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cops4O88544 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Gm13453-201ENSMUST00000118708 357 ntBASIC11.97□□□□□ -0.49
Cops4O88544 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.97□□□□□ -0.49
Cops4O88544 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.97□□□□□ -0.49
Cops4O88544 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cops4O88544 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cops4O88544 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cops4O88544 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cops4O88544 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cops4O88544 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.96□□□□□ -0.49
Cops4O88544 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms