Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Gm12176-201ENSMUST00000121420 875 ntBASIC14.24□□□□□ -0.13
Trdmt1O55055 Gm12566-201ENSMUST00000121479 359 ntBASIC14.24□□□□□ -0.13
Trdmt1O55055 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.24□□□□□ -0.13
Trdmt1O55055 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdmt1O55055 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdmt1O55055 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trdmt1O55055 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm13996-201ENSMUST00000118456 430 ntBASIC14.23□□□□□ -0.13
Trdmt1O55055 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm22902-201ENSMUST00000158488 302 ntBASIC14.23□□□□□ -0.13
Trdmt1O55055 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Trdmt1O55055 Gm37986-201ENSMUST00000193285 383 ntBASIC14.23□□□□□ -0.13
Trdmt1O55055 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.23□□□□□ -0.13
Trdmt1O55055 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.23□□□□□ -0.13
Trdmt1O55055 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.23□□□□□ -0.13
Trdmt1O55055 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdmt1O55055 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm25732-201ENSMUST00000175168 60 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm27023-201ENSMUST00000182372 285 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm44651-201ENSMUST00000207343 372 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm8385-201ENSMUST00000058999 643 ntBASIC14.22□□□□□ -0.13
Trdmt1O55055 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms