Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ptch2O35595 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm12502-201ENSMUST00000120197 444 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Gm14381-201ENSMUST00000122105 414 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm24548-201ENSMUST00000158650 108 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm27320-201ENSMUST00000184892 109 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Gm29199-201ENSMUST00000187766 775 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ptch2O35595 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.3□□□□□ -0.28
Ptch2O35595 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm5781-201ENSMUST00000219792 443 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ptch2O35595 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.29□□□□□ -0.28
Ptch2O35595 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.29□□□□□ -0.28
Ptch2O35595 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ptch2O35595 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptch2O35595 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.29□□□□□ -0.28
Ptch2O35595 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptch2O35595 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.28□□□□□ -0.28
Ptch2O35595 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.28□□□□□ -0.28
Ptch2O35595 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.28□□□□□ -0.28
Ptch2O35595 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ptch2O35595 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.28□□□□□ -0.28
Ptch2O35595 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptch2O35595 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms