Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Polr1aO35134 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Polr1aO35134 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC19.57■□□□□ 0.72
Polr1aO35134 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC19.57■□□□□ 0.72
Polr1aO35134 AC141438.2-201ENSMUST00000215068 271 ntBASIC19.57■□□□□ 0.72
Polr1aO35134 AC153954.1-201ENSMUST00000216959 255 ntBASIC19.57■□□□□ 0.72
Polr1aO35134 AC135114.1-201ENSMUST00000228682 270 ntBASIC19.57■□□□□ 0.72
Polr1aO35134 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Polr1aO35134 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.57■□□□□ 0.72
Polr1aO35134 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Polr1aO35134 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Gm15432-201ENSMUST00000121106 195 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Gm8199-201ENSMUST00000121323 823 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Gm27530-201ENSMUST00000184096 98 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Gm6781-201ENSMUST00000038304 1242 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC19.56■□□□□ 0.72
Polr1aO35134 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Gm9279-201ENSMUST00000223175 1606 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Polr1aO35134 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC19.56■□□□□ 0.72
Polr1aO35134 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Polr1aO35134 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC19.56■□□□□ 0.72
Polr1aO35134 AC154849.4-201ENSMUST00000224868 365 ntBASIC19.56■□□□□ 0.72
Polr1aO35134 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Polr1aO35134 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.55■□□□□ 0.72
Polr1aO35134 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC19.55■□□□□ 0.72
Polr1aO35134 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Polr1aO35134 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC19.55■□□□□ 0.72
Polr1aO35134 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC19.55■□□□□ 0.72
Polr1aO35134 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Polr1aO35134 Gm25881-201ENSMUST00000157783 103 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 Gm9022-201ENSMUST00000182482 992 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 CT571245.2-201ENSMUST00000218421 305 ntBASIC19.55■□□□□ 0.72
Polr1aO35134 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Polr1aO35134 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Polr1aO35134 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Polr1aO35134 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Polr1aO35134 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.54■□□□□ 0.72
Polr1aO35134 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Polr1aO35134 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC19.54■□□□□ 0.72
Polr1aO35134 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms