Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.1□□□□□ -0.47
Hps1O08983 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.1□□□□□ -0.47
Hps1O08983 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hps1O08983 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hps1O08983 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.1□□□□□ -0.47
Hps1O08983 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.1□□□□□ -0.47
Hps1O08983 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.09□□□□□ -0.47
Hps1O08983 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.09□□□□□ -0.47
Hps1O08983 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Hps1O08983 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Hps1O08983 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.09□□□□□ -0.47
Hps1O08983 Gm6916-202ENSMUST00000205523 195 ntBASIC12.09□□□□□ -0.47
Hps1O08983 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hps1O08983 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.09□□□□□ -0.47
Hps1O08983 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hps1O08983 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hps1O08983 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.08□□□□□ -0.47
Hps1O08983 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hps1O08983 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hps1O08983 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hps1O08983 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hps1O08983 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.08□□□□□ -0.48
Hps1O08983 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Gm12742-201ENSMUST00000117326 410 ntBASIC12.08□□□□□ -0.48
Hps1O08983 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.08□□□□□ -0.48
Hps1O08983 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.08□□□□□ -0.48
Hps1O08983 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hps1O08983 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.08□□□□□ -0.48
Hps1O08983 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hps1O08983 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hps1O08983 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hps1O08983 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms