Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.35□□□□□ -0.27
Trove2O08848 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Gm24420-201ENSMUST00000176676 59 ntBASIC13.35□□□□□ -0.27
Trove2O08848 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 Gm27306-201ENSMUST00000183970 107 ntBASIC13.35□□□□□ -0.27
Trove2O08848 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.35□□□□□ -0.27
Trove2O08848 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.35□□□□□ -0.27
Trove2O08848 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.35□□□□□ -0.27
Trove2O08848 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.35□□□□□ -0.27
Trove2O08848 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trove2O08848 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.35□□□□□ -0.27
Trove2O08848 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trove2O08848 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trove2O08848 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.34□□□□□ -0.27
Trove2O08848 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trove2O08848 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.34□□□□□ -0.27
Trove2O08848 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trove2O08848 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trove2O08848 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trove2O08848 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.34□□□□□ -0.27
Trove2O08848 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.34□□□□□ -0.27
Trove2O08848 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.34□□□□□ -0.27
Trove2O08848 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.34□□□□□ -0.27
Trove2O08848 Gm27989-201ENSMUST00000184721 107 ntBASIC13.34□□□□□ -0.27
Trove2O08848 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.34□□□□□ -0.27
Trove2O08848 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.34□□□□□ -0.27
Trove2O08848 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trove2O08848 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trove2O08848 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trove2O08848 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trove2O08848 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trove2O08848 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.33□□□□□ -0.27
Trove2O08848 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Trove2O08848 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Trove2O08848 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Gm6912-201ENSMUST00000117218 544 ntBASIC13.33□□□□□ -0.28
Trove2O08848 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trove2O08848 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.33□□□□□ -0.28
Trove2O08848 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.33□□□□□ -0.28
Trove2O08848 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trove2O08848 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trove2O08848 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms