Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm43118-201ENSMUST00000199149 775 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.18■□□□□ 0.02
Tcof1O08784 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Tcof1O08784 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tcof1O08784 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tcof1O08784 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tcof1O08784 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Tcof1O08784 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tcof1O08784 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm14723-201ENSMUST00000118686 215 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 Gm14704-201ENSMUST00000120300 874 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm43133-201ENSMUST00000197472 463 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.17■□□□□ 0.02
Tcof1O08784 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.17■□□□□ 0.02
Tcof1O08784 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tcof1O08784 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm3890-201ENSMUST00000182416 207 ntBASIC15.17■□□□□ 0.02
Tcof1O08784 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Tcof1O08784 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tcof1O08784 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tcof1O08784 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcof1O08784 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tcof1O08784 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.16■□□□□ 0.02
Tcof1O08784 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 Mir8109-201ENSMUST00000184375 117 ntBASIC15.16■□□□□ 0.02
Tcof1O08784 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.16■□□□□ 0.02
Tcof1O08784 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.16■□□□□ 0.02
Tcof1O08784 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tcof1O08784 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcof1O08784 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.15■□□□□ 0.02
Tcof1O08784 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms