Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AlyrefO08583 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
AlyrefO08583 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Gm11930-201ENSMUST00000117788 190 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Gm14460-201ENSMUST00000121511 639 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Gm8492-201ENSMUST00000182375 987 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Mir6923-201ENSMUST00000184592 72 ntBASIC13.19□□□□□ -0.3
AlyrefO08583 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.19□□□□□ -0.3
AlyrefO08583 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AlyrefO08583 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
AlyrefO08583 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.18□□□□□ -0.3
AlyrefO08583 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm25072-201ENSMUST00000175233 235 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Gm25700-201ENSMUST00000177693 110 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm28196-201ENSMUST00000187719 640 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.18□□□□□ -0.3
AlyrefO08583 Gm45856-201ENSMUST00000212752 416 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.18□□□□□ -0.3
AlyrefO08583 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Gm16372-201ENSMUST00000073088 450 ntBASIC13.18□□□□□ -0.3
AlyrefO08583 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AlyrefO08583 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AlyrefO08583 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AlyrefO08583 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
AlyrefO08583 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AlyrefO08583 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AlyrefO08583 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AlyrefO08583 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AlyrefO08583 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.17□□□□□ -0.3
AlyrefO08583 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AlyrefO08583 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms