Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm16202-201ENSMUST00000117532 544 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Mir7654-201ENSMUST00000185082 70 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm44069-201ENSMUST00000204898 506 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm15823-201ENSMUST00000064305 670 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.29□□□□□ -0.28
Pcdh9F8VPK8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms