Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm3619-201ENSMUST00000219947 775 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm19009-201ENSMUST00000223072 823 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm24891-201ENSMUST00000104391 136 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm14274-201ENSMUST00000117182 615 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm14034-201ENSMUST00000120147 551 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm14005-208ENSMUST00000223654 681 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm4604-201ENSMUST00000025040 390 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc188F6WEU2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Mir8115-201ENSMUST00000184992 119 ntBASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm43962-201ENSMUST00000203898 190 ntBASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.97□□□□□ -0.33
Ccdc188F6WEU2 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms