Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc149F6V035 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Mir877-201ENSMUST00000104738 85 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm13492-201ENSMUST00000119772 665 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm25668-201ENSMUST00000157700 129 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm23363-201ENSMUST00000175024 79 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm38241-201ENSMUST00000192641 898 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm37259-201ENSMUST00000193903 849 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.16□□□□□ -0.3
Ccdc149F6V035 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc149F6V035 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.15□□□□□ -0.3
Ccdc149F6V035 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gm22323-201ENSMUST00000103832 109 ntBASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gm13316-201ENSMUST00000140537 691 ntBASIC13.15□□□□□ -0.3
Ccdc149F6V035 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gm26956-201ENSMUST00000182176 986 ntBASIC13.15□□□□□ -0.3
Ccdc149F6V035 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc149F6V035 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc149F6V035 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Ccdc149F6V035 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc149F6V035 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc149F6V035 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms