Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Gm8737-201ENSMUST00000122208 642 ntBASIC17.33■□□□□ 0.37
Chd2E9PZM4 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.33■□□□□ 0.37
Chd2E9PZM4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Gm5100-201ENSMUST00000195631 589 ntBASIC17.33■□□□□ 0.37
Chd2E9PZM4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd2E9PZM4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC17.33■□□□□ 0.36
Chd2E9PZM4 Gm12407-201ENSMUST00000180219 324 ntBASIC17.33■□□□□ 0.36
Chd2E9PZM4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.33■□□□□ 0.36
Chd2E9PZM4 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.33■□□□□ 0.36
Chd2E9PZM4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd2E9PZM4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Gm22920-201ENSMUST00000102175 109 ntBASIC17.32■□□□□ 0.36
Chd2E9PZM4 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.32■□□□□ 0.36
Chd2E9PZM4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.32■□□□□ 0.36
Chd2E9PZM4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd2E9PZM4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm19009-201ENSMUST00000223072 823 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm15566-201ENSMUST00000121130 590 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm27910-201ENSMUST00000185004 107 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm3551-201ENSMUST00000190750 664 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm9111-201ENSMUST00000219394 709 ntBASIC17.31■□□□□ 0.36
Chd2E9PZM4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd2E9PZM4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chd2E9PZM4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chd2E9PZM4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd2E9PZM4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms