Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Gm16026-204ENSMUST00000162652 683 ntBASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-2D3Z4R4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm14859-201ENSMUST00000117752 357 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm12882-201ENSMUST00000121696 517 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm7063-201ENSMUST00000186840 981 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-2D3Z4R4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms