Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm15236-201ENSMUST00000117309 379 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm13813-201ENSMUST00000120998 787 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm24548-201ENSMUST00000158650 108 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm16570-201ENSMUST00000161951 436 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gm5781-201ENSMUST00000219792 443 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmf1B9EKI3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Gm11793-201ENSMUST00000120433 981 ntBASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmf1B9EKI3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gm38092-201ENSMUST00000195600 653 ntBASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.52■□□□□ 0.4
Tmf1B9EKI3 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmf1B9EKI3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tmf1B9EKI3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tmf1B9EKI3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tmf1B9EKI3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tmf1B9EKI3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Gm14723-201ENSMUST00000118686 215 ntBASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Gm8738-201ENSMUST00000172606 329 ntBASIC17.51■□□□□ 0.39
Tmf1B9EKI3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms