Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm22331-201ENSMUST00000158066 136 ntBASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 AY702102-202ENSMUST00000194651 1173 ntBASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.65□□□□□ -0.38
Clip3B9EHT4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Clip3B9EHT4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.64□□□□□ -0.39
Clip3B9EHT4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gm8810-201ENSMUST00000172895 754 ntBASIC12.64□□□□□ -0.39
Clip3B9EHT4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clip3B9EHT4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm12742-201ENSMUST00000117326 410 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm11803-201ENSMUST00000119966 444 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm24644-201ENSMUST00000157114 139 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Mir1938-201ENSMUST00000158746 100 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm45841-201ENSMUST00000207700 164 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms