Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.94□□□□□ -0.66
Col6a4A2AX52 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a4A2AX52 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.94□□□□□ -0.66
Col6a4A2AX52 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm11978-201ENSMUST00000122315 466 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm24749-201ENSMUST00000157838 343 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm7848-201ENSMUST00000210739 718 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm19459-201ENSMUST00000176240 835 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Daam2-202ENSMUST00000224595 1926 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.93□□□□□ -0.66
Col6a4A2AX52 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a4A2AX52 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms