Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Gm14350-201ENSMUST00000116642 640 ntBASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Itm2b-204ENSMUST00000228637 783 ntBASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc112A0AUP1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Mir686-201ENSMUST00000102174 109 ntBASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm28631-201ENSMUST00000190740 334 ntBASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc112A0AUP1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc112A0AUP1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc112A0AUP1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms