Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gm12341-201ENSMUST00000119724 503 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gm28631-201ENSMUST00000190740 334 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gm6983-201ENSMUST00000214912 628 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc194A0A140LIT1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm44397-201ENSMUST00000195950 113 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc194A0A140LIT1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms