Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm14494-201ENSMUST00000118786 435 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mir874-201ENSMUST00000104769 76 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm15653-201ENSMUST00000119247 907 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms