Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm16215-201ENSMUST00000161990 637 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm6218-201ENSMUST00000219812 628 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Mir7023-201ENSMUST00000185093 64 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.63□□□□□ -0.71
Trav18A0A075B656 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav18A0A075B656 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms