Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav7n-4A0A075B620 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm15460-201ENSMUST00000118147 391 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm11025-201ENSMUST00000140773 466 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm18049-201ENSMUST00000208909 581 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Dupd1-202ENSMUST00000224735 548 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav7n-4A0A075B620 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Gm9719-201ENSMUST00000162765 543 ntBASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav7n-4A0A075B620 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms