Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PdfS4R2K0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PdfS4R2K0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PdfS4R2K0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
PdfS4R2K0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm13823-201ENSMUST00000119930 345 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.98□□□□□ -0.81
PdfS4R2K0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm29541-201ENSMUST00000191351 678 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.98□□□□□ -0.81
PdfS4R2K0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
PdfS4R2K0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PdfS4R2K0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm24543-201ENSMUST00000103867 82 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm6222-201ENSMUST00000120787 396 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm17837-201ENSMUST00000186435 985 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PdfS4R2K0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.97□□□□□ -0.81
PdfS4R2K0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms