Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.73□□□□□ -0.53
H2afb3S4R1G7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Syt7-204ENSMUST00000223586 1344 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm15371-201ENSMUST00000117057 784 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Mir7023-201ENSMUST00000185093 64 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm29608-201ENSMUST00000190444 463 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm38223-201ENSMUST00000194484 695 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm19220-201ENSMUST00000222682 803 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm5867-201ENSMUST00000063197 592 ntBASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afb3S4R1G7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms