Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne6Q9Z140 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne6Q9Z140 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpne6Q9Z140 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.67□□□□□ -0.38
Cpne6Q9Z140 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne6Q9Z140 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm13123-201ENSMUST00000122173 492 ntBASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm7029-201ENSMUST00000173226 450 ntBASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm38266-201ENSMUST00000194931 421 ntBASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm3961-201ENSMUST00000204425 994 ntBASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne6Q9Z140 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm16379-201ENSMUST00000161469 348 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm8762-201ENSMUST00000193486 339 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm43133-201ENSMUST00000197472 463 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne6Q9Z140 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne6Q9Z140 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.65□□□□□ -0.39
Cpne6Q9Z140 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Cpne6Q9Z140 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne6Q9Z140 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms