Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm14381-201ENSMUST00000122105 414 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm7584-201ENSMUST00000175829 940 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm6334-201ENSMUST00000207083 228 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcb1Q9Z0H3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcb1Q9Z0H3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm24255-201ENSMUST00000104481 128 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcb1Q9Z0H3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms