Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm16372-201ENSMUST00000073088 450 ntBASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40aQ9R1C7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.31□□□□□ -0.12
Prpf40aQ9R1C7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Gm6447-201ENSMUST00000118905 835 ntBASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms