Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.66□□□□□ -0.38
Cdh17Q9R100 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdh17Q9R100 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh17Q9R100 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 Gm18473-201ENSMUST00000220543 868 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.65□□□□□ -0.38
Cdh17Q9R100 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh17Q9R100 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh17Q9R100 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh17Q9R100 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.64□□□□□ -0.39
Cdh17Q9R100 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Gm2495-201ENSMUST00000191160 466 ntBASIC12.64□□□□□ -0.39
Cdh17Q9R100 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.64□□□□□ -0.39
Cdh17Q9R100 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh17Q9R100 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.63□□□□□ -0.39
Cdh17Q9R100 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh17Q9R100 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms