Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm11591-201ENSMUST00000120063 702 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm19309-201ENSMUST00000218295 205 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf3Q9QXK7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf3Q9QXK7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf3Q9QXK7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.96□□□□□ -0.18
Cpsf3Q9QXK7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.96□□□□□ -0.18
Cpsf3Q9QXK7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.96□□□□□ -0.18
Cpsf3Q9QXK7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm14704-201ENSMUST00000120300 874 ntBASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm17420-201ENSMUST00000164753 153 ntBASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm37008-201ENSMUST00000195712 319 ntBASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm19184-201ENSMUST00000196798 928 ntBASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf3Q9QXK7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm12291-201ENSMUST00000121627 311 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm18041-201ENSMUST00000218210 618 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm9899-201ENSMUST00000065519 555 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Gm10478-201ENSMUST00000084451 396 ntBASIC13.94□□□□□ -0.18
Cpsf3Q9QXK7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms