Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm13736-201ENSMUST00000119272 253 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm44683-201ENSMUST00000209088 484 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Gm8712-201ENSMUST00000221090 701 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.29□□□□□ -0.44
SrfQ9JM73 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SrfQ9JM73 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SrfQ9JM73 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm13996-201ENSMUST00000118456 430 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm8312-201ENSMUST00000119380 618 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm24380-201ENSMUST00000122696 324 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm17790-201ENSMUST00000191545 1228 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm37533-201ENSMUST00000193848 545 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm10312-201ENSMUST00000078515 489 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.28□□□□□ -0.44
SrfQ9JM73 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SrfQ9JM73 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SrfQ9JM73 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SrfQ9JM73 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SrfQ9JM73 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.27□□□□□ -0.45
SrfQ9JM73 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.27□□□□□ -0.45
SrfQ9JM73 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
SrfQ9JM73 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SrfQ9JM73 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.27□□□□□ -0.45
SrfQ9JM73 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.27□□□□□ -0.45
SrfQ9JM73 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SrfQ9JM73 Gm25700-201ENSMUST00000177693 110 ntBASIC12.27□□□□□ -0.45
SrfQ9JM73 Gm28450-201ENSMUST00000187349 638 ntBASIC12.27□□□□□ -0.45
SrfQ9JM73 Gm38217-201ENSMUST00000194358 910 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms