Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
OtofQ9ESF1 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.82□□□□□ -0.36
OtofQ9ESF1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm5363-201ENSMUST00000211927 938 ntBASIC12.81□□□□□ -0.36
OtofQ9ESF1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm27341-201ENSMUST00000183570 106 ntBASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.81□□□□□ -0.36
OtofQ9ESF1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
OtofQ9ESF1 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.81□□□□□ -0.36
OtofQ9ESF1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm25732-201ENSMUST00000175168 60 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm25700-201ENSMUST00000177693 110 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Mir433-201ENSMUST00000093564 124 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms