Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm9797-201ENSMUST00000052902 613 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lima1Q9ERG0 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.83□□□□□ -0.35
Lima1Q9ERG0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lima1Q9ERG0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lima1Q9ERG0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms