Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm43514-201ENSMUST00000198852 424 ntBASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn3Q9DCB1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm4804-201ENSMUST00000182234 999 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn3Q9DCB1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms