Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Mir7221-201ENSMUST00000184009 72 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm37424-201ENSMUST00000191727 561 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm42693-201ENSMUST00000196779 631 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm10012-201ENSMUST00000078252 192 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.09□□□□□ -0.47
Cdc40Q9DC48 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdc40Q9DC48 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.47
Cdc40Q9DC48 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdc40Q9DC48 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdc40Q9DC48 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.08□□□□□ -0.47
Cdc40Q9DC48 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Gm5370-201ENSMUST00000187187 574 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms