Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm12928-201ENSMUST00000117115 573 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm11978-201ENSMUST00000122315 466 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm44069-201ENSMUST00000204898 506 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm16372-201ENSMUST00000073088 450 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc89Q9DA73 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Gm18018-201ENSMUST00000198273 408 ntBASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Gm6458-201ENSMUST00000211573 635 ntBASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc89Q9DA73 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Gm12091-201ENSMUST00000146791 830 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Gm27701-201ENSMUST00000184498 110 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms