Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Gm5356-201ENSMUST00000093326 615 ntBASIC14.29□□□□□ -0.12
Cfap53Q9D439 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.29□□□□□ -0.12
Cfap53Q9D439 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cfap53Q9D439 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm13612-201ENSMUST00000119276 390 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm44069-201ENSMUST00000204898 506 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm7287-201ENSMUST00000205267 602 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap53Q9D439 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.27□□□□□ -0.12
Cfap53Q9D439 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.27□□□□□ -0.12
Cfap53Q9D439 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap53Q9D439 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.27□□□□□ -0.13
Cfap53Q9D439 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.27□□□□□ -0.13
Cfap53Q9D439 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap53Q9D439 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms