Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm15693-201ENSMUST00000120470 637 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm43703-201ENSMUST00000200523 763 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Gm17330-201ENSMUST00000221047 165 ntBASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chaf1bQ9D0N7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Chaf1bQ9D0N7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm15240-201ENSMUST00000118156 720 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm3436-201ENSMUST00000179930 840 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm27772-201ENSMUST00000184900 187 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm44344-201ENSMUST00000200287 129 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chaf1bQ9D0N7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chaf1bQ9D0N7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms