Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt2Q9CZN7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Gm11424-201ENSMUST00000121929 829 ntBASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt2Q9CZN7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms