Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm6152-201ENSMUST00000151704 340 ntBASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm14350-201ENSMUST00000116642 640 ntBASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm8463-201ENSMUST00000208573 613 ntBASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm18473-201ENSMUST00000220543 868 ntBASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Khdc3Q9CWU5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Khdc3Q9CWU5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms