Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.28■□□□□ 0.04
Smc3Q9CW03 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Gm15371-201ENSMUST00000117057 784 ntBASIC15.28■□□□□ 0.04
Smc3Q9CW03 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Gm20949-201ENSMUST00000206478 952 ntBASIC15.28■□□□□ 0.04
Smc3Q9CW03 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.28■□□□□ 0.04
Smc3Q9CW03 Gm19220-201ENSMUST00000222682 803 ntBASIC15.28■□□□□ 0.04
Smc3Q9CW03 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.27■□□□□ 0.04
Smc3Q9CW03 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.27■□□□□ 0.04
Smc3Q9CW03 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.27■□□□□ 0.04
Smc3Q9CW03 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc3Q9CW03 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc3Q9CW03 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm12341-201ENSMUST00000119724 503 ntBASIC15.26■□□□□ 0.03
Smc3Q9CW03 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.26■□□□□ 0.03
Smc3Q9CW03 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.26■□□□□ 0.03
Smc3Q9CW03 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.26■□□□□ 0.03
Smc3Q9CW03 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc3Q9CW03 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms