Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm45841-201ENSMUST00000207700 164 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm2810-201ENSMUST00000118681 990 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm14140-201ENSMUST00000119999 995 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm21362-201ENSMUST00000194272 928 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm19931-201ENSMUST00000198920 368 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RTRAFQ9CQE8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms