Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.73□□□□□ -0.37
Trim16Q99PP9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.73□□□□□ -0.37
Trim16Q99PP9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.73□□□□□ -0.37
Trim16Q99PP9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim16Q99PP9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm27701-201ENSMUST00000184498 110 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm38223-201ENSMUST00000194484 695 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.72□□□□□ -0.37
Trim16Q99PP9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim16Q99PP9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.71□□□□□ -0.37
Trim16Q99PP9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim16Q99PP9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 618.9 ms